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Table 3 Identification of motif patterns in ESRD

From: The characteristics of extrachromosomal circular DNA in patients with end-stage renal disease

Motif sequences

P value

CTCCCTGGGAGGCCN

1e−5

ACAGGAAGTG

1e−4

CRGCTGBNGNSNNSAGATAA

1e−3

YAGATCTRAW

1e−3

TAATCCCN

1e−2

BTBRAGTGSN

1e−2

TTTTTTTTTT

1e−2

RATWCCGTTA

1e−2

AGTTTCAKTTTC

1e−2

NGCGTGGGCGGR

1e−2

AAAAAAAAAA

1e−2

AVCCGGAAGT

1e−2

AAACMATTAN

1e−2

RSCACTYRAG

1e−2

RGGATTAR

1e−2

CDCCGCCGTC

1e−2

ATGCATAATTCA

1e−2

BCWGATTCAATCAAN

1e−2

AAAGRGGAAGTG

1e−2

TWCCHWATWDGGAAA

1e−2

  1. N, degenerate bases of A/T/C/G; R, degenerate bases of A/G; B, degenerate bases of T/C/G; S, degenerate bases of C/G; Y, degenerate bases of T/C; W, degenerate bases of A/T