Skip to main content

Table 1 Binding-free energies and energy components predicted by MM/GBSA (kcal/mol)

From: PPARG is a potential target of Tanshinone IIA in prostate cancer treatment: a combination study of molecular docking and dynamic simulation based on transcriptomic bioinformatics

System name

PPARG_Tanshinone-IIA

ΔEvdw

− 43.08 ± 1.85

ΔEelec

− 0.25 ± 1.88

ΔGGB

13.33 ± 1.60

ΔGSA

− 5.10 ± 0.12

ΔGbind

− 35.10 ± 1.88

  1. ΔEvdW van der Waals energy, ΔEelec electrostatic energy, ΔGGB electrostatic contribution to solvation, ΔGSA non-polar contribution to solvation, ΔGbind binding-free energy