From: Refining mutanome-based individualised immunotherapy of melanoma using artificial intelligence
Advantages | Description |
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Enhance understanding of melanoma mutanome [120,121,122,123,124, 129, 132, 133, 135,136,137] | • Deep finding algorithms can promote mutanome examination, that is used to advance rapid technology-based identification and validation of individual mutanomes by IVAC |
• Neural networks recognise mutation-derived neoantigens by incorporating genomic, epigenomic, and immunogenicity information at an unprecedented scale and swiftness | |
• Uncover mutations related to immunotherapy response or resistance, guiding individual categorisation and combination tactics | |
• Potential to reveal new pathways to conquer resistance by targeting special mutational signatures | |
• Supply insights into optimising mutanome-focused methods through rational drug combinations impacting ribosome biogenesis or epigenetics | |
• Radiomics extract patterns from imaging modalities like CT, MRI, and PET | |
• Patterns derived from radiomics serve as a basis for response rate monitoring, risk stratification, survival analysis, metastatic capability predictions, and patient monitoring | |
• In individualised therapy, radiomics discerns subtle differences in images, forming patterns influencing therapy choices | |
Facilitate the development of melanoma vaccines [95,96,97, 125, 128] | • Personalised melanoma vaccines |
• Radiomics contributes to individualised therapy by generating predictive signatures | |
• Optimised identification of neoantigens, leading to the development of individualised vaccines for different mutational variants | |
• Streamline vaccines suited to individual immune profiles | |
• Hasten the development of large amounts of vaccines for individuals in a short period of time | |
Refining adoptive cell therapy immunotherapy option [9, 70, 89, 125,126,127, 141, 142] | • Refine ACT |
• Enhance the modulation of T cells, having greater specificity for individual mutations | |
• Limit resource waste and identify major lapses and potential adverse effects early through simulation | |
• Mitigate T cell specificity loss, optimised by TCR deep sequencing | |
• Development of novel ACTs that recognise individual neoantigens, enabled by advancements in predictive algorithms for minigenes to analyse T cell reactivity in tumours | |
• Application in signature-immune marker correlations extends to other cancers like non-small-cell lung and renal cancers | |
• Improve prediction capacity, thus increasing drug discovery pipeline efficiency | |
• Predict specific type of mutations that initiate cancer in an individual via a noninvasive method (machine learning-assisted radiomics technique) | |
• Improve predictions in patients at higher risk of metastasis based on their mutanome | |
• Streamline metastatic risk assessment | |
• Allows for early preventive measures that can increase patient survival rates | |
• Automate the identification and segmentation of lesions in melanoma | |
• Radiomics serve as a predictive signature generator, aiding in better correlation with immune markers | |
• Signature correlations have been utilised in evaluating survival in melanoma patients treated with pembrolizumab |