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Table 1 Epilepsy risk SNPs regulate GADD45A and PTPRO expression in human brain tissue

From: Identification of potential crucial genes and therapeutic targets for epilepsy

SNP

Target gene

eQTL-p

Human brain tissue

Rs4794333

GADD45A

0.0037

Thalamus

Rs68082256

GADD45A

0.022

Medulla

Rs11943905

GADD45A

0.045

Temporal cortex

Rs12185644

GADD45A

0.041

Temporal cortex

Rs6432877

PTPRO

0.035

Occipital cortex

Rs2212656

PTPRO

0.031

Occipital cortex

Rs1402398

PTPRO

0.042

Putamen

Rs11890028

PTPRO

0.016

Frontal cortex

Rs887696

PTPRO

0.036

Occipital cortex

Rs1044352

PTPRO

0.0052

Occipital cortex

Rs13200150

PTPRO

0.037

Temporal cortex

Rs4671319

PTPRO

0.036

Temporal cortex

  1. SNP single-nucleotide polymorphism, eQTL expression quantitative trait loci